Author

Zhe Chen

University of SouthamptonORCID 0009-0002-1228-8323Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Zhe Chen1 paper · Chengdu Institute of Biology;

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Organism:human· 1

Frequent Co-Authors

Mahesan NiranjaniD· 1 shared Mengting Chen· 1 shared Rob M. EwingiD· 1 shared Sarah EnnisiD· 1 shared Yihua WangiD· 1 shared Zhiyong Tang· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Mahesan NiranjanORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintMay 26, 2026

GAE-Δ: A Graph-Learning Framework for Gene Network Rewiring and Clinical Outcome Prediction from Multi-Omics Data

Zhiyong Tang, Zhe Chen, Mengting Chen…·Rob M. Ewing

GAE-Δ uses a graph autoencoder to analyze multi-omics data and predict clinical outcomes while identifying gene network rewiring associated with cancer progression.

DOI 10.64898/2026.05.21.726880

humanbulk RNA-seq

𝕏 PostBluesky