Sohini Mukherjee

The paper develops a composite genome approach to analyze TF occupancy diversity in barley using short-read data, showing improved accuracy over SNP-replacement strategies for MOA-seq analyses.

This paper introduces an optimized ChIP-exo protocol for mammalian cells, improving efficiency and compatibility with modern sequencing platforms.

This study investigates the barley methylome, identifies differentially methylated regions, and shows their association with gene expression and phenotypic traits, improving genomic prediction models.

This study compares neutralization profiles of contemporary HIV-1 clade C viruses from India and South Africa against broadly neutralizing antibodies, finding distinct resistance patterns and env signatures.