Author

Riddhish Thakare

University of FloridaORCID 0009-0002-7569-7087Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Approach:deep learning· 1 Assay:DNA methylation· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1

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Amirhossein TaghaviiD· 1 shared Chenglong LiiD· 1 shared Jessica L. Childs‐DisneyiD· 1 shared Jielei WangiD· 1 shared Matthew David DisneyiD· 1 shared Yanjun LiiD· 1 shared

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Amirhossein TaghaviORCID

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1 paper

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BioinformaticsbioRxivPreprintJun 19, 2026

Geometric Deep Learning Reveals Ligandable and Cryptic RNA Binding Small Molecule Pockets (SMARTPocket)

Riddhish Thakare, Amirhossein Taghavi, Jielei Wang…·Yanjun Li

SMARTPocket uses geometric deep learning to predict RNA-small molecule binding pockets from 3D structures, outperforming existing methods and identifying cryptic ligandable sites.

1 citation

protein structureDNA methylation

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