Author

Lucca Faieta

University of California SystemORCID 0009-0002-8548-865XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:plant (other)· 2 Approach:statistical model· 2 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Anna Jo MuhichiD· 2 shared Céline CaseysiD· 2 shared Cloe TomiD· 2 shared Daniel J. KliebensteiniD· 2 shared Karishma SrinivasiD· 2 shared Ritu SinghiD· 2 shared Brooke Grabbe· 1 shared Jack McMillaniD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 27 mutual co-author links

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2 shared papersGenomics

Anna Jo MuhichORCID

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2 papers

Recent·Most cited

GenomicsProceedings of the National Academy of SciencesPeer-reviewedMay 19, 2026

Combined generalist and host-specific transcriptional strategies enable host generalism in the fungal pathogen Botrytis cinerea

Ritu Singh, Anna Jo Muhich, Cloe Tom…·Daniel J. Kliebenstein

This study identifies general and host-specific transcriptional strategies in Botrytis cinerea that enable broad host range through metabolic and host-responsive gene modules.

2 citations

plant (other)bulk RNA-seq

𝕏 PostBluesky

Plant BiologyG3 Genes Genomes GeneticsPeer-reviewedMay 12, 2026

Host-Botrytis co-transcriptomics reveals finely tuned interactions with closely related legumes

Anna Jo Muhich, Ritu Singh, Cloe Tom…·Daniel J. Kliebenstein

This study uses co-transcriptomics to analyze host-pathogen interactions between Botrytis cinerea and two legumes, finding that both host and pathogen exhibit transcriptional plasticity leading to similar disease outcomes despite genetic divergence.

2 citationstop 3%

plant (other)bulk RNA-seq

𝕏 PostBluesky