Author

Florian Albrecht

Science for Life LaboratoryORCID 0009-0002-9253-5290Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Assay:metagenomics· 1

Frequent Co-Authors

Johan HenrikssoniD· 2 shared Laura M. CarrolliD· 2 shared Arthur StenlundiD· 1 shared Chetan SharafiD· 1 shared Chinmay Kumar DwibediiD· 1 shared Hadrien GourléiD· 1 shared Iryna YakovenkoiD· 1 shared J. BlomiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersMicrobiology

Johan HenrikssonORCID

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2 papers

Recent·Most cited

Scalable and interpretable secretion system annotation with Sismis

Martin F. Larralde, Florian Albrecht, J. Blom, Johan Henriksson, Laura M. Carroll

Sismis is a machine learning tool that accurately detects and classifies secretion systems in bacterial (meta)genomes, identifying many previously unknown systems.

bioRxiv · Sep 9, 2025 · PreprintMicrobiology

Scalable single-cell metagenomic analysis with Bascet and Zorn

Hadrien Gourlé, Iryna Yakovenko, Jyoti Verma, Julian Dicken, Florian Albrecht, Arthur Stenlund, Chetan Sharaf, Chinmay Kumar Dwibedi, Linas Mažutis, Johan Normark, Nongfei Sheng, Nicklas Strömberg, Tommy Löfstedt, Laura M. Carroll, Johan Henriksson

This paper introduces Bascet and Zorn, tools for scalable single-cell metagenomic analysis, demonstrating their utility on mock and human saliva samples.

bioRxiv · Jun 20, 2025 · PreprintMicrobiology