Author

Valerio Galanti

Columbia UniversityORCID 0009-0003-2752-7566Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:cell type annotation· 1 Approach:machine learning (classical)· 1 Approach:optimal transport· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Andrew J. BlumbergiD· 1 shared Elham AziziiD· 1 shared Lingting ShiiD· 1 shared Yining LiuiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

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4 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Andrew J. BlumbergORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintNov 30, 2024

Automated Cell Type Annotation with Reference Cluster Mapping

Valerio Galanti, Lingting Shi, Elham Azizi…·Andrew J. Blumberg

This paper introduces RefCM, a method that improves cell type annotation in scRNA-seq data using optimal transport and integer programming, achieving accurate cross-technology, cross-tissue, and cross-species mappings.

DOI 10.1101/2024.11.30.626130

scRNA-seqoptimal transport

𝕏 PostBluesky