Author

Yu Chen

RIKEN Center for Sustainable Resource ScienceORCID 0009-0003-4936-5481Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Yu Chen14 papers · Bristol-Myers Squibb (United States)

Biology Disciplines

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Plant Biology· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 3 Approach:statistical model· 3 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

Keiko SugimotoiD· 3 shared Akira IwaseiD· 2 shared Arika TakebayashiiD· 2 shared Ayako KawamuraiD· 2 shared David S. FaveroiD· 1 shared Dongbo Shi· 1 shared Duncan ColemaniD· 1 shared Eriko SasakiiD· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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3 shared papersPlant Biology

Keiko SugimotoORCID

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3 papers

Recent·Most cited

Plant BiologyDevelopmental CellPeer-reviewedAug 1, 2026

Prolonged cold exposure enhances regeneration potential in Arabidopsis

Fu‐Yu Hung, Yetkin Caka Ince, Ayako Kawamura…·Keiko Sugimoto

This study shows that prolonged cold exposure enhances regeneration potential in Arabidopsis by activating specific transcription factors and histone acetylation mechanisms.

2 citations

ArabidopsisDNA methylation

𝕏 PostBluesky

GeneticsbioRxivPreprintJul 1, 2026

Revising the genetic and epigenetic architecture of in vitro regeneration capacity in natural Arabidopsis thaliana populations

Kodai Arima, Yu Chen, Keiko Sugimoto, Eriko Sasaki

The paper analyzes genetic and epigenetic variation in Arabidopsis thaliana to identify key modifiers of in vitro regeneration capacity.

DOI 10.64898/2026.06.26.734650

ArabidopsisDNA methylation

𝕏 PostBluesky

Plant BiologyThe Plant CellPeer-reviewedApr 21, 2026

Wounding activates the HSFA1 transcription factors to promote cellular reprogramming in Arabidopsis

Duncan Coleman, Akira Iwase, Ayako Kawamura…·Keiko Sugimoto

This study shows HSFA1 transcription factors are crucial for wound-induced cellular reprogramming in Arabidopsis, promoting callus formation and shoot regeneration.

4 citationstop 1%

Arabidopsisbulk RNA-seq

𝕏 PostBluesky