Author

Yiyang Shen

University of IowaORCID 0009-0004-0260-7321Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Organism:human· 1 Assay:metabolomics· 1 Assay:metagenomics· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Erliang ZengiD· 1 shared Shri Vishalini RajaramiD· 1 shared Weiran WangiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperBioinformatics

Erliang ZengORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintAug 21, 2025

DeepBioSim: Efficient and Versatile Methods for Microbiome Data Simulation with Minimal Statistical Assumptions

Yiyang Shen, Shri Vishalini Rajaram, Weiran Wang, Erliang Zeng

DeepBioSim generates realistic microbiome datasets using deep learning, without strong assumptions or phylogenetic input, and can also simulate single-organism omics profiles.

3 citations

humanmetagenomics

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