Author

Xiran Wang

Duke UniversityORCID 0009-0004-8908-8252Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Synthetic Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Approach:deep learning· 1 Assay:metagenomics· 1

Frequent Co-Authors

Alexandra L. Hoffman· 1 shared Allison J. LopatkiniD· 1 shared Ashwini R. Shende· 1 shared César A. Villalobos· 1 shared Daniel Mark ShapiroiD· 1 shared Dongheon LeeiD· 1 shared Emma J. ChoryiD· 1 shared Emrah ŞimşekiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperSynthetic Biology

Alexandra L. Hoffman

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

A foundation model for microbial growth dynamics

Zachary A. Holmes, Irida Shyti, Alexandra L. Hoffman, Katherine E. Duncker, Helena R. Ma, Zhengqing Zhou, Dongheon Lee, Rohan Maddamsetti, Kyeri Kim, Emrah Şimşek, Grayson S. Hamrick, Hye-In Son, César A. Villalobos, Jia Grace Lu, Yuanchi Ha, , Lingchong You

This paper develops a foundation model for microbial growth dynamics using self-supervised learning on diverse datasets, enabling accurate reconstruction and prediction of growth patterns and antibiotic responses.

bioRxiv · Dec 3, 2025 · PreprintSynthetic Biology