Author

Jianbin Kong

Sun Yat-sen UniversityORCID 0009-0005-1609-5459Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Research Focus:database / resource· 2 Research Focus:software / tool· 2 Approach:statistical model· 2 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Edward Charles HolmesiD· 3 shared Mǎng ShīiD· 3 shared Qinyu GouiD· 3 shared Chunmei LiiD· 2 shared Deyin GuoiD· 2 shared Wei-Chen WuiD· 2 shared Xue LiuiD· 2 shared Yanni SuniD· 2 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersBioinformatics

Edward Charles HolmesORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

BioinformaticsBriefings in BioinformaticsPeer-reviewedJul 1, 2025

SegFinder: an automated tool for identifying RNA virus genome segments through co-occurrence in multiple sequenced samples

Xue Liu, Jianbin Kong, Yongtao Shan…·Mǎng Shī

SegFinder identifies RNA virus genome segments by analyzing co-occurrence across samples, discovering novel segments and expanding known segmented virus families.

5 citations

metagenomicsstatistical model

𝕏 PostBluesky

MicrobiologybioRxivPreprintFeb 9, 2025

Infectome Analysis of Small Mammals in Southern China Reveals Ecological Associations and Emerging Threats from Diverse Pathogens

Gen-Yang Xin, Daxi Wang, Xin Zhang…·Mǎng Shī

The paper analyzes the pathogen infectome of small mammals in southern China, identifying new pathogens and factors influencing their distribution and diversity.

1 citation

mousemetagenomics

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BioinformaticsMolecular Biology and EvolutionPeer-reviewedSep 25, 2024

VirID: Beyond Virus Discovery - An Integrated Platform for Comprehensive RNA Virus Characterization

Ziyue Yang, Yongtao Shan, Xue Liu…·Mǎng Shī

VirID improves RNA virus discovery and characterization from metagenomic data by reducing false positives, accurately estimating diversity, and identifying virus-host associations.

9 citations

humanplant (other)

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