Ziqi Liu

This study integrates single-cell and spatial transcriptomic data from mouse hearts post-myocardial infarction to identify functionally distinct lymphatic endothelial cell subtypes and their roles in tissue repair and inflammation.

RNADiffFold predicts RNA secondary structures using discrete diffusion models, showing competitive performance and capturing dynamic structural aspects.

AptaDiff generates and optimizes aptamers using diffusion models, outperforming existing methods and experimental candidates in binding affinity.

scSpace reconstructs a pseudo-space from single-cell RNA-seq data to identify spatially variable cell subclusters and their biological relevance.