Author

Stavroula Svolou

National Centre of Scientific Research "Demokritos"ORCID 0009-0006-5047-8506Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:graph neural network· 1 Approach:machine learning (classical)· 1 Assay:protein sequence· 1

Frequent Co-Authors

Anastasia KritharaiD· 2 shared Γεώργιος ΠαλιούραςiD· 2 shared Adelaide Maria Fernandes Borralho· 1 shared Alain Geille· 1 shared Albert Carbonell· 1 shared Alessandro PrigioneiD· 1 shared Alex Garanto· 1 shared Alex Mackenzie· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Anastasia KritharaORCID

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2 papers

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedJul 13, 2026

CPP2Vec: a Representation Learning Approach for Cell-Penetrating Peptides Prediction

Stavroula Svolou, Vasileios Konstantakos, Anastasia Krithara, Γεώργιος Παλιούρας

The paper introduces CPP2Vec, a Word2Vec-based method for predicting cell-penetrating peptides, and compares it with pre-trained LLM-based models, showing strong predictive performance.

1 citation

protein sequencemachine learning (classical)

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedMay 7, 2026

KG-Bench: Benchmarking Graph Neural Network Algorithms for Drug Repurposing

Siqi Wei, Christo Sasi, Jelle Piepenbrock…·Sara Pintado

KG-Bench benchmarks graph neural networks for drug repurposing using the Open Targets dataset, finding TransformerConv achieves the highest performance.

DOI 10.1093/bioinformatics/btag159

graph neural networkbenchmarking

𝕏 PostBluesky