Author

Haisheng Sun

Peking UniversityORCID 0009-0006-5481-7990Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1 Microbiology· 1 Molecular Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 5 Organism:plant (other)· 3 Assay:whole-genome sequencing· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:virus· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1

Frequent Co-Authors

Chonghuai LiuiD· 4 shared Wenxiu YeiD· 4 shared Junjie MeiiD· 3 shared Li GuoiD· 3 shared Linling GuoiD· 3 shared Wei ZhengiD· 3 shared Xuenan ZhangiD· 3 shared Falak Sher Khan· 2 shared

Activity by Year

2017-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersGenomics

Chonghuai LiuORCID

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5 papers

Recent·Most cited

BioinformaticsbioRxivPreprintAug 20, 2026

PlantOmicsGWAS: An end-to-end, reproducible framework for plant genome-wide association and genomic prediction using linear and pan-genome references

Falak Sher Khan, Ahmed yassin, Shams ur Rehman…·Wenxiu Ye

PlantOmicsGWAS provides a reproducible framework for plant GWAS and genomic prediction, supporting both linear and pan-genome references to improve analysis of structural variations.

DOI 10.64898/2026.08.16.745120

plant (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintApr 23, 2026

Origin and evolution of grapevine genomes

Xiangfeng Wang, Jie Sun, Jingxuan Wang…·Li Guo

This study investigates the origin and evolution of grapevines through phylogenomic analysis of 29 genome assemblies, revealing evolutionary relationships and genomic features contributing to their adaptation.

1 citation

viruswhole-genome sequencing

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MicrobiologyMicrobiomePeer-reviewedDec 1, 2025

Grapevine phyllosphere pan-metagenomics reveals pan-microbiome structure, diversity, and functional roles in downy mildew resistance

Jingyun Jin, Xiangfeng Wang, Xuenan Zhang…·Li Guo

This study uses pan-metagenomics to analyze the grapevine phyllosphere microbiome, revealing its structure, diversity, and functional roles in downy mildew resistance.

6 citations

virusmetagenomics

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Plant BiologyNature GeneticsPeer-reviewedFeb 26, 2025

Super Pangenome of Grapevines Empowers Improvement of the Oldest Domesticated Fruit

Li Guo, Xiangfeng Wang, Dilay Hazal Ayhan…·Wenxiu Ye

The paper assembles and annotates haplotype-resolved genomes of grapevines to uncover genetic diversity and disease resistance mechanisms, identifying structural variants linked to downy mildew resistance.

69 citationstop 1%

plant (other)whole-genome sequencing

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Molecular BiologybioRxivPreprintJul 28, 2017

Identification of disease resistance genes from a Chinese wild grapevine (Vitis davidii) by analysing grape transcriptomes and transgenic Arabidopsis

Ying Zhang, Jia‐Long Yao, Feng Hu…·Chonghuai Liu

The paper identifies disease resistance genes in Chinese wild grapevine by comparing transcriptomes and validates one gene's role in enhancing resistance in Arabidopsis.

DOI 10.1101/169631

plant (other)bulk RNA-seq

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