Author

Karenna Ng

Scripps Research InstituteORCID 0009-0006-8227-7178Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:benchmarking· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Assay:protein sequence· 1 Research Focus:protein structure prediction· 1 Research Focus:sequence-to-function modeling· 1 Approach:statistical model· 1

Frequent Co-Authors

Bryan S. BrineyiD· 2 shared Andrew B. WardiD· 1 shared Daniel MuemaiD· 1 shared Jonathan HurtadoiD· 1 shared Judie MaguraiD· 1 shared Mahdi Shafiei NeyestanakiD· 1 shared Nasreen IsmailiD· 1 shared Praneeth GangavarapuiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

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10 top collaborators · 45 mutual co-author links

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2 shared papersImmunology

Bryan S. BrineyORCID

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2 papers

Recent·Most cited

ImmunologybioRxivPreprintSep 2, 2025

Data-optimal scaling of paired antibody language models

Mahdi Shafiei Neyestanak, Sarah M. Burbach, Karenna Ng…·Bryan S. Briney

This study derives a scaling law for antibody language models, showing that performance improvements require both large model size and sufficient data.

1 citation

statistical modelbenchmarking

𝕏 PostBluesky

ImmunologyPatternsPeer-reviewedApr 25, 2025

Focused learning by antibody language models using preferential masking of non-templated regions

Karenna Ng, Bryan S. Briney

This paper introduces a preferential masking strategy for antibody language models to improve prediction of non-templated residues in CDR3 regions, enhancing classification and specificity.

12 citationstop 3%

protein sequencedeep learning

𝕏 PostBluesky