Author

Junjie Tang

Carnegie Mellon UniversityORCID 0009-0007-0612-2497Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1

Frequent Co-Authors

Buqing YeiD· 1 shared Hongxue MengiD· 1 shared Jian MaiD· 1 shared Jianzhong Jeff Xi· 1 shared Kun QianiD· 1 shared Ruibin XiiD· 1 shared Shahul AlamiD· 1 shared Shaoheng LiangiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

Buqing YeORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintSep 27, 2026

A meta-interaction basis for cell-cell communication in tissues

Junjie Tang, Shaoheng Liang, Shahul Alam…·Jian Ma

SpiderNet identifies cell-cell communication programs from spatial transcriptomics data, revealing key interactions and their associations with phenotypes and therapeutic responses.

DOI 10.64898/2026.09.21.753369

humanspatial transcriptomics

𝕏 PostBluesky

BioinformaticsbioRxivPreprintSep 12, 2024

Interpretable high-resolution dimension reduction of spatial transcriptomics data by SpaHDmap

Junjie Tang, Zihao Chen, Kun Qian…·Ruibin Xi

SpaHDmap improves spatial transcriptomics data resolution by integrating gene expression with histology images, producing interpretable embeddings and detecting refined spatial structures.

1 citation

spatial transcriptomicsstatistical model

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