Author

Zhuoyang Chen

The Hong Kong University of Science and Technology (Guangzhou)ORCID 0009-0007-1859-4571Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:protein design· 2 Assay:protein sequence· 2 Research Focus:protein structure prediction· 2 Research Focus:benchmarking· 1 Assay:protein structure· 1 Research Focus:sequence-to-function modeling· 1 Approach:statistical model· 1

Frequent Co-Authors

Qiong LuoiD· 2 shared Ruoqi WangiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

2 top collaborators · 1 mutual co-author link

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2 shared papersBioinformatics

Qiong LuoORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 12, 2026

ProtBLIP2-SST: Protein Function Prediction via BLIP2 with Sequence, Structure, and Text

Zhuoyang Chen, Qiong Luo

ProtBLIP2-SST generates open-ended protein function captions by integrating sequence, structure, and text using a two-stage framework.

DOI 10.64898/2026.07.10.737551

protein sequenceprotein structure

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJul 11, 2026

ProtAug: An Empirical Investigation of pLM-Guided Data Augmentation for Protein Sequence Prediction Tasks

Zhuoyang Chen, Ruoqi Wang, Qiong Luo

This paper evaluates pLM-guided data augmentation for protein sequence prediction, showing that it improves performance across tasks with variation levels between 2-30%.

DOI 10.64898/2026.07.10.737545

protein sequencedeep learning

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