Author

Abdul Rahman Diab

Simon Fraser UniversityORCID 0009-0007-2273-2658Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Organism:human· 2 Assay:ATAC-seq· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:imaging· 1 Research Focus:imputation· 1

Frequent Co-Authors

Maxwell W. LibbrechtiD· 2 shared Mehdi Foroozandeh ShahrakiiD· 2 shared Abdallah LamaneiD· 1 shared Benjamin C. HitziD· 1 shared Habib DaneshpajouhiD· 1 shared Ian WhalingiD· 1 shared Ishan Goel· 1 shared J. Michael CherryiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersGenomics

Maxwell W. LibbrechtORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 13, 2026

Pan-cancer estimation of prognostic immune biomarkers from histopathology using artificial intelligence

Yijun Li, Abdul Rahman Diab, Abdallah Lamane…·William E. Lotter

This paper develops an AI model to estimate immune biomarkers from H&E images, showing it can predict prognostic outcomes as effectively as costly mIF assays.

DOI 10.64898/2026.10.06.757083

humanimaging

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GenomicsbioRxivPreprintJan 23, 2025

CANDI: self-supervised, confidence-aware denoising imputation of genomic data

Mehdi Foroozandeh Shahraki, Abdul Rahman Diab, Maxwell W. Libbrecht

CANDI improves epigenome imputation by predicting raw counts, handling covariates, and providing uncertainty measures using a self-supervised Transformer model.

DOI 10.1101/2025.01.23.634626

ATAC-seqChIP-seq

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GenomicsbioRxivPreprintOct 26, 2023

Integrative chromatin state annotation of 234 human ENCODE4 cell types using Segway reveals disease drivers

Marjan Farahbod, Abdul Rahman Diab, Paul Sud…·Maxwell W. Libbrecht

The paper presents ENCODE4 Segway annotations for 234 human cell types, improving sensitivity in capturing regulatory patterns relevant to disease and traits.

2 citations

humanChIP-seq

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