Author

Azad Ahmed

Drexel UniversityORCID 0009-0007-4419-6251Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Ahmed M. MoustafaiD· 1 shared Angelina L Wang· 1 shared Brandy Neide· 1 shared Brian L. WigdahliD· 1 shared Colleen M. BiancoiD· 1 shared Emilie Rabut· 1 shared Frederic D. BushmaniD· 1 shared Garth D. EhrlichiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperGenomics

Ahmed M. MoustafaORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintMar 15, 2026

Identification of disease-specific alleles and gene duplications from 1,600 Haemophilus influenzae genomes using predicted protein analyses from an unsupervised language model and clinical metadata

Phillip R Palmer, Joshua P. Earl, Joshua Chang Mell…·Garth D. Ehrlich

The paper identifies disease-specific alleles and gene duplications in H. influenzae by analyzing protein sequences and clinical metadata from 1,600 genomes.

DOI 10.64898/2026.03.12.711436

humanwhole-genome sequencing

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GenomicsOpen Forum Infectious DiseasesPeer-reviewedJun 4, 2021

Comparative Analysis of Emerging B.1.1.7+E484K SARS-CoV-2 isolates from Pennsylvania

Ahmed M. Moustafa, Colleen M. Bianco, Lidiya Denu…·Paul Joseph Planet

The paper reports and compares B.1.1.7+E484K SARS-CoV-2 isolates from Pennsylvania, identifying 7 clonal complexes and 3 distinct clades in the US.

22 citations

viruswhole-genome sequencing

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