Anton Bushuiev

The paper validates and analyzes 12,000 AI-designed CAR-T binders from a global competition, identifying successful designs and factors improving their performance.

Riboseek is a fast and sensitive sequence alignment tool for RNA and DNA that uses di-mers for alignment, outperforming BLASTN and nhmmer in speed and sensitivity.

MARTS-DB is a manually curated database of terpene synthase mechanisms and reactions, providing over 2,600 reactions and supporting computational analysis and machine learning.

An all-atom diffusion model unifying biomolecular structure prediction and sequence-structure generation designs experimentally validated nanobodies, mini-proteins, and linear or cyclic peptides across 26 diverse targets.

The paper introduces EnzymeExplorer, a machine-learning pipeline that predicts enzyme function, discovering new terpenoid synthases in archaea and expanding their known taxonomic distribution.