Maya Shen

The paper introduces causarray, a causal inference framework for analyzing genomic data under unmeasured confounders, and applies it to identify causal effects in autism and Alzheimer's disease studies.

DAWN-SCAPE distinguishes between genes causing phenotypic differences and those affected by the phenotype, applying it to autism and Alzheimer's data to identify upstream and downstream biological processes.

This study evaluates how large language models generate summaries of bioinformatics analyses, finding they produce readable and safe summaries but often misinterpret visualizations and lack novel insights.