Fahad Kamulegeya

The paper shows that the same selector transcription factor can be regulated by different patterning axes through distinct enhancers in Drosophila neurogenesis, revealing a cis-regulatory mechanism for neuronal diversity.

This paper introduces PISA, a tool for interpreting sequence-to-function neural networks, enabling the discovery of nucleosome-positioning motifs and understanding cis-regulatory code through MNase-seq data.

The paper uses AkitaV2 to analyze CTCF-binding site sequences and predict their role in genome folding, identifying key sequence determinants and grammatical rules for insulation strength and pattern formation.