Author

Shawn Mishra

Regeneron (United States)ORCID 0009-0008-3570-010XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Research Focus:GWAS / association mapping· 1 Assay:GWAS summary statistics· 1 Organism:human· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Yu BaiiD· 2 shared Adam H. BuchananiD· 1 shared Adam J. Mansfield· 1 shared Alan R. ShuldineriD· 1 shared Alessandro Di Gioia· 1 shared Alexander E. LopeziD· 1 shared Alexander Popov· 1 shared Alexandra M. Kaufman· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Yu BaiORCID

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2 papers

Recent·Most cited

BioinformaticsScientific ReportsPeer-reviewedMay 24, 2025

Image guided construction of a common coordinate framework for spatial transcriptome data

Peter F. Lais, Shawn Mishra, Kun Xiong…·Yu Bai

This paper introduces STaCker, a deep learning algorithm that aligns spatial transcriptome slices using image registration, improving spatial concordance and enabling data integration.

7 citations

spatial transcriptomicsdeep learning

𝕏 PostBluesky

Genetic & Genomic MedicineCommunications BiologyPeer-reviewedJun 3, 2022

Population-scale analysis of common and rare genetic variation associated with hearing loss in adults

Kavita Praveen, Lee Dobbyn, Lauren Gurski…·Joe Burns

This study identifies 53 genetic loci associated with hearing loss, including 15 novel ones, using genome-wide and exome-sequencing data from multiple cohorts.

36 citations

humanGWAS summary statistics

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