Author

Nikhil Kumar

Harvard UniversityORCID 0009-0008-6374-1857Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Nikhil Kumar2 papers · UiT The Arctic University of Norway

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Organism:mouse· 2 Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Alaleh AzhiriD· 1 shared Amol Carl ShettyiD· 1 shared B. AlveriD· 1 shared Chuck McCallumiD· 1 shared Claire M. FraseriD· 1 shared David A. RaskoiD· 1 shared Fritz LekschasiD· 1 shared Hanspeter PfisteriD· 1 shared

Activity by Year

2018-2018 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Alaleh AzhirORCID

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2 papers

Recent·Most cited

GenomicsScientific ReportsPeer-reviewedAug 31, 2018

Targeted enrichment outperforms other enrichment techniques and enables more multi-species RNA-Seq analyses

Matthew C. Chung, Laura E. Teigen, Hong Liu…·Julie C. Dunning Hotopp

This study compares enrichment techniques for multi-species RNA-Seq, finding that targeted enrichment with Agilent SureSelect improves read mapping to target organisms.

30 citations

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BioinformaticsGenome biologyPeer-reviewedAug 24, 2018

✦ In-depth digest

HiGlass: Web-based Visual Exploration and Analysis of Genome Interaction Maps

Peter Kerpedjiev, Nezar A. Abdennur, Fritz Lekschas…·Nils Gehlenborg

HiGlass, a web-based, containerized viewer, enables continuous multiscale navigation of Hi-C contact maps alongside genomic tracks using composable views linked by location and zoom.

2,485 citationstop 1%

𝕏 PostBluesky