Salomé Carcy

The paper identifies 17 human thymic epithelial cell subsets using single-cell data and shows they share a common ancestor and regulatory logic, with some conservation in mice.

This study compares human innate-like T cells (Tinn) with conventional T cells and mouse models, revealing distinct transcriptional programs and developmental pathways.

MetaIBS performs a large-scale meta-analysis of 16S rRNA amplicon data from IBS patients and healthy controls, identifying consistent microbial taxa differences.

The paper introduces tascCODA, a Bayesian model for analyzing compositional data from amplicon and single-cell sequencing, showing improved performance in identifying compositional changes in microbial and cell type data.