Author

Yulong Qin

Chinese Academy of SciencesORCID 0009-0009-2761-0750Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:deconvolution· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Chengbin Hu· 1 shared Daxi WangiD· 1 shared Dongyue YuiD· 1 shared Haohao Deng· 1 shared Jialing CheniD· 1 shared Jiayi LiiD· 1 shared Jinghua SuniD· 1 shared Peidi Ren· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Chengbin Hu

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMay 27, 2026

STID: A Standardized Spatial Transcriptomic Analysis Framework for Infectious Diseases

Yulong Qin, Yue Peng, Q Chen…·Xiaofeng Shi

STID provides a standardized framework for analyzing spatial transcriptomic data in infectious diseases, enabling pathogen background correction, niche identification, and multi-sample comparative analyses.

DOI 10.64898/2026.05.24.727492

spatial transcriptomicsstatistical model

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BioinformaticsbioRxivPreprintFeb 28, 2024

Pathway-enhanced Transformer-based robust model for quantifying cell types of origin of cell-free transcriptome

Shuo Yan, Xuetao Tian, Yulong Qin…·Wenjing Wang

Deconformer improves cell type deconvolution of cell-free RNA by integrating biological pathways, showing better performance and interpretability across multiple datasets.

2 citations

humanbulk RNA-seq

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