Author

Adel Heydarabadipour

University of WashingtonORCID 0009-0009-2865-6128Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:software / tool· 2

Frequent Co-Authors

Herbert M. SauroiD· 2 shared Joseph L. HellersteiniD· 2 shared Lucian P. SmithiD· 2 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

3 top collaborators · 3 mutual co-author links

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2 shared papersSystems Biology

Herbert M. SauroORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintApr 10, 2026

Antimony 3: Extending human-readable model definitions for SBML Level 3 Core and Packages

Adel Heydarabadipour, Lucian P. Smith, Joseph L. Hellerstein, Herbert M. Sauro

Antimony 3 updates the human-readable modeling language to support SBML Level 3 features, enabling unified model definitions with kinetic reactions, uncertainty, annotations, and visualizations.

DOI 10.64898/2026.04.07.717118

experimental assaysoftware / tool

𝕏 PostBluesky

Systems BiologyPLoS Computational BiologyPeer-reviewedSep 22, 2025

SBMLNetwork: a framework for standards-based visualization of biochemical models

Adel Heydarabadipour, Lucian P. Smith, Joseph L. Hellerstein, Herbert M. Sauro

SBMLNetwork provides a framework for standards-based visualization of biochemical models by automating the generation of SBML-compliant visualization data.

1 citation

experimental assaysoftware / tool

𝕏 PostBluesky