Author

Viktoria Bojilova

Memorial Sloan Kettering Cancer CenterORCID 0009-0009-4902-7216Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Assay:CITE-seq· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Andrew McPhersoniD· 3 shared Sohrab P. ShahiD· 3 shared Andrew T. ChowiD· 2 shared Benjamin D. GreenbaumiD· 2 shared Bharat BurmaniD· 2 shared Farhia KabeeriD· 2 shared Nicholas CegliaiD· 2 shared Nicole RuskiD· 2 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioinformatics

Andrew McPhersonORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsNature CommunicationsPeer-reviewedJul 20, 2023

GeneVector: Identification of transcriptional programs using dense vector representations defined by mutual information.

Nicholas Ceglia, Zachary M. Sethna, Samuel S. Freeman…·Andrew McPherson

GeneVector uses mutual information-based dimensionality reduction to identify transcriptional programs and classify cell types across single-cell RNA-seq datasets.

10 citations

scRNA-seqstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 1, 2022

TCRi: Information theoretic metrics for single cell RNA and TCR sequencing in cancer

Nicholas Ceglia, Zachary M. Sethna, Yuval Elhanati…·Benjamin D. Greenbaum

This paper introduces TCRi, an information theoretic framework to analyze TCR and gene expression data from cancer patients, showing improved characterization of clonotypes and their phenotypic changes post-therapy.

2 citations

humanscRNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintSep 13, 2018

Resource: Scalable whole genome sequencing of 40,000 single cells identifies stochastic aneuploidies, genome replication states and clonal repertoires

Emma Laks, Hans Zahn, Daniel Lai…·Samuel A. J. R. Aparicio

13 citations

humanwhole-genome sequencing

𝕏 PostBluesky