Author

Lin Li

University of FloridaORCID 0009-0009-5433-6777Unclaimed ORCID profile · follow to get notified of new preprints

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Lin Li6 papers · BGI Group (China)

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Organism:human· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Qiang Yang· 2 shared Rui YiniD· 2 shared Hongru Zhao· 1 shared Jie Xu· 1 shared Lu Li· 1 shared Mingyi XieiD· 1 shared Qin Ma· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 17 mutual co-author links

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2 shared papersBioinformatics

Qiang Yang

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2 papers

Recent·Most cited

BioinformaticsJournal of Biomedical InformaticsPeer-reviewedSep 6, 2026

GIN-CRC-Pareto: A graph-based Pareto-optimal multi-task learning framework to identify miRNA-target interactions in colorectal cancer

Lin Li, Qiang Yang, Lu Li…·Rui Yin

GIN-CRC-Pareto identifies miRNA-target interactions in colorectal cancer using a graph-based multi-task learning framework, outperforming existing methods in accuracy and AUC.

DOI 10.1016/j.jbi.2026.105099

humandeep learning

𝕏 PostBluesky

GenomicsbioRxivPreprintMay 18, 2026

DamageFormer: a damage-aware multimodal deep learning framework for DNA lesion identification from nanopore sequencing

Qiang Yang, Lin Li, Qin Ma, Rui Yin

DamageFormer detects and localizes DNA lesions from nanopore sequencing with high accuracy and generalization to unseen damage types.

DOI 10.64898/2026.05.14.725245

long-read sequencingdeep learning

𝕏 PostBluesky