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bioRxivBiophysicsPreprint

Quantum mechanics predicts Bicoid interpretation time of less than a second

Irfan LoneiD

PDFDOI

Abstract

The establishment and interpretation of the concentration gradient of the morphogen Bicoid (Bcd) is crucial for the successful embryonic development of fruit flies. However, the biophysical mechanisms behind the timely formation and subsequent interpretation of this prototypical morphogen gradient by its target genes are not yet completely understood. Recently a discrete time, one-dimensional quantum walk model of Bcd gradient formation has been successfully used to explain the observed multiple dynamic modes of the system. However, the question of its precise interpretation by its primary target gene hunchback (hb) remains still unanswered. In this paper it will be shown that the interpretation of the Bcd gradient by its primary target gene hb, with the observed precision of [~] 10%, takes a time period of less than a second, as expected on the basis of recent experimental observations. Furthermore, the quantum walk model is also used to explain certain key observations of recent optogenetic experiments concerning the time windows for Bcd interpretation. Finally, it is concluded that the incorporation of quantum effects into the treatment of Bcd gradient represents a viable step in exploring its dynamics.

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I. Lone, C. Trindle·bioRxiv·Mar 1, 2023