Analytical ChemistryBioinformaticsPeer-reviewed journal article
Automated osteosclerosis grading of clinical biopsies using infrared spectroscopic imaging
Rupali MankariD, Carlos Bueso-RamosiD, C. Cameron YiniD, Juliana E. Hidalgo‐LόpeziD, Sebastian BerishaiD, Mustafa KansiziD, David Matthew MayerichiD
Abstract
Osteosclerosis and myefibrosis are complications of myeloproliferative neoplasms. These disorders result in excess growth of trabecular bone and collagen fibers that replace hematopoietic cells, resulting in abnormal bone marrow function. Treatments using imatinib and JAK2 pathway inhibitors can be effective on osteosclerosis and fibrosis, therefore accurate grading is critical for tracking treatment effectiveness. Current grading standards use a four-class system based on analysis of biopsies stained with three histological stains: hematoxylin and eosin (H&E), Massons trichrome, and reticulin. However, conventional grading can be subjective and imprecise, impacting the effectiveness of treatment. In this paper, we demonstrate that mid-infrared spectroscopic imaging may serve as a quantitative diagnostic tool for quantitatively tracking disease progression and response to treatment. The proposed approach is label-free and provides automated quantitative analysis of osteosclerosis and collagen fibrosis.
- organism: human
- assay: imaging
- research focus: cell type annotation
- research focus: differential expression
- approach: experimental assay
- Citations
- 12
- FWCI
- 0.73
- Field percentile
- top 32%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Machine learning assisted mid-infrared spectrochemical fibrillar collagen imaging in clinical tissues
Wihan Adi, Bryan E. Rubio Perez, … Filiz Yesilköy·Journal of Biomedical OpticsPeer-reviewed·Sep 27, 2024
- Non-destructive Chemical Imaging of Bone Tissue for Intraoperative and Diagnostic Applications
K. S. Shin, A. Wong, … D. Fu·bioRxiv·May 14, 2021
- Characterising Type I Collagen Architecture in Human Bone and Osteosarcoma with Second Harmonic Generation Microscopy
Belle Creith, James Harrison, … Sumeet Mahajan·bioRxiv·Jul 23, 2025
- Imaging and quantification of prostate cancer-associated bone by polarization-sensitive optical coherence tomography
- Skeletal Muscle Remodeling in Immobilized Patients: Determined Using a Parameter Estimation Histomorphometric Approach
B. Formosa, A. Liyanaarachchi, … B. P. Jena·bioRxiv·Jun 17, 2020
- Label-free imaging of collagen fibers in tissue slices using phase imaging with computational specificity
M. Sakakura, V. Macias, … G. Popescu·bioRxiv·Nov 19, 2021