Sign in
GenomicsAmerican Journal of Medical Genetics Part A
Peer-reviewed journal article

A de novo variant in PAK2 detected in an individual with Knobloch type 2 syndrome

Elizabeth A. WerreniD, Louisa KalsneriD, Jessica M. EwaldiD, Michael Peracchio, Cameron King, Purva Vats, Peter A. AudanoiD, Peter N. RobinsoniD, Mark D. AdamsiD, Melissa A. Kelly, Adam P. MatsoniD

Abstract

P21-activated kinase 2 (PAK2) is a serine/threonine kinase essential for a variety of cellular processes including signal transduction, cellular survival, proliferation, and migration. A recent report proposed monoallelic PAK2 variants cause Knobloch syndrome type 2 (KNO2)--a developmental disorder primarily characterized by ocular anomalies. Here, we identified a novel de novo heterozygous missense variant in PAK2, NM_002577.4:c.1273G>A, p.(D425N), by whole genome sequencing in an individual with features consistent with KNO2. Notable clinical phenotypes include global developmental delay, congenital retinal detachment, mild cerebral ventriculomegaly, hypotonia, FTT, pyloric stenosis, feeding intolerance, patent ductus arteriosus, and mild facial dysmorphism. The p.(D425N) variant lies within the protein kinase domain and is predicted to be functionally damaging by in silico analysis. Previous clinical genetic testing did not report this variant due to unknown relevance of PAK2 variants at the time of testing, highlighting the importance of reanalysis. Our findings also substantiate the candidacy of PAK2 variants in KNO2 and expand the KNO2 clinical spectrum.

02 /Specification & Classification

Click any tag to browse matching papers

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISAntonarakis '21Mao '20Her '26Nomakuchi '25Boer '22Halldorsdot '26
85% semantic matchGenetics
Stylianos E. Antonarakis, Aleš Holoubek, Melivoia Rapti+11 more·Human Molecular Genetics·Mar 1, 2021· 18 citations