Sign in
BioinformaticsbioRxiv
Preprint

VolcanoR - web service to produce volcano plots and do basic enrichment analysis

Vladimir A. NaumoviD, I. S. Balashov, Vadim LagutiniD, Borovikov P.I. BorovikoviD, Alexey Alexeev

Abstract

Summary: We introduce VolcanoR - web based tool to analyse results of differential gene expression. It takes a table containing gene name p-value and foldChange as input data. It can produce publication quality volcano plots, apply different p-value and fold change thresholds and do basic GeneOntology and KEGG enrichment analysis with selected gene set. For now it supports H.sapiens, R.norvegicus and M.musclus.\n\nAvailability and Implementation: VolcanoR is wtitten using R Shiny framework. It is publically available at http://volcanor.bioinf.su or stand-alone application, that can be downloaded at https://github.com/vovalive/volcanoR\n\nContact: looongdog@gmail.com

PDFDOICode

02 /Specification & Classification

Click any tag to browse matching papers

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISO’Connell '25Powers '19Moghul '17Goedhart '20Koziara '16Zhao '22
72% semantic matchBioinformatics
Thomas M. O’Connell·Bioinformatics·Jun 19, 2025· 8 citations