bioRxivBiophysicsPreprint
PSF broadening due to fluorescence emission
Abstract
Fluorescent structures are nowadays commonly used in the field of biological imaging. However the emission of fluorescence is always given within a finite spectrum. When the imaging systems point spread function is measured, this can be described as an incoherent summation of individual single-wavelength PSFs, weighted by the emission spectrum. As the full-width-half-maximum of the PSF scales inversely with the wavelength and most emission spectra exhibit a fluorescence tail at longer wave-lengths, this contributes significantly to lateral broadening. In our work we theoretically quantify this effect by deriving an analytic expression, which has been verified against some numerical simulations (rel. error on average 3 %). We report a FWHM-broadening on the order of 10 nm and additionally propose a way to overcome this broadening by splitting the emission spectrum into multiple wavelength segments. The corresponding image data is recombined in Fourier space by weighted averaging, leading to an improved signal-to-noise ratio at high spatial frequencies and a reduction of the FWHM of up to 8 nm (relative reduction of the broadening by {approx} 70 %). We also introduce a corrected wavelength, which in combination with already existing PSF calculation tools, describes a theoretical PSF which incorporates the aforementioned broadening effect.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Simultaneous multicolor fluorescence imaging using duplication-based PSF splitting
R. Van den Eynde, F. Hertel, … P. Dedecker·bioRxiv·Oct 4, 2022
- Flat-field illumination for quantitative fluorescence imaging
- Spatially pooling photon information enables photon-efficient quantitative imaging
Wonsang Hwang, Iván Coto Hernández, Conor L. Evans·bioRxiv·Aug 24, 2026
- PSF-Driven Spatio-Temporal Blending in Fluorescence Lifetime Imaging Microscopy and Its Mitigation via Mean-Shift Super-Resolution-Based Masking.
Mario González-Gutiérrez, Diana M. Vázquez-Enciso, … Adan Guerrero·ACS PhotonicsPeer-reviewed·Sep 14, 2026
- Simultaneous Spectral Differentiation of Multiple Fluorophores in Super-resolution Imaging Using a Glass Phase Plate
S. I. Fernando, J. T. Martineau, … J. Gerton·bioRxiv·Jul 11, 2022
- Photon-statistics in sensitized emission FRET and FLIM: a comparative theoretical analysis
A. Esposito·bioRxiv·Sep 20, 2019