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Evolutionary BiologyMethods in Ecology and Evolution
Peer-reviewed journal article

RevGadgets: an R Package for visualizing Bayesian phylogenetic analyses from RevBayes

C. M. Tribble, W. A. Freyman, J. Y. Lim, M. J. Landis, J. Barido-Sottani, B. T. Kopperud, S. Höhna, M. R. May

Abstract

O_LIStatistical phylogenetic methods are the foundation for a wide range of evolutionary and epidemiological studies. However, as these methods grow increasingly complex, users often encounter significant challenges with summarizing, visualizing, and communicating their key results. C_LIO_LIWe present RevGadgets, an R package for creating publication-quality figures from the results of a large variety of phylogenetic analyses performed in RevBayes (and other phylogenetic software packages). C_LIO_LIWe demonstrate how to use RevGadgets through a set of vignettes that cover the most common use cases that researchers will encounter. C_LIO_LIRevGadgets is an open-source, extensible package that will continue to evolve in parallel with RevBayes, helping researchers to make sense of and communicate the results of a diverse array of analyses. C_LI [Bayesian phylogenetics, data visualization, R, RevBayes]

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02 /Specification & Classification

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