Atomistic Mechanism of Calcium-Mediated Inward Rectification of the MthK Potassium Channel by Solid-State NMR and MD Simulations

Abstract

Inward rectification is a fundamental but poorly understood phenomenon in potassium channel physiology. Despite its physiological importance, the exact mechanism has remained elusive. In this work, we uncover a previously unrecognized calcium-mediated gating mechanism in the MthK potassium channel that sheds new light on this essential process. By combining state-of-the-art proton-detected solid-state NMR spectroscopy with atomistic molecular dynamics simulations, we reveal that divalent calcium ions bind to a novel site just below the selectivity filter, physically obstructing the outward flow of potassium ions whereas inward flow is still possible - analogous to a molecular ball check valve. Secondly, the binding of Ca2+ to the newly identified site leads to stabilization of the selectivity filter and allows us to directly observe ion-ion interactions in the filter. These results offer direct experimental support for the long-debated "direct knock-on" mechanism, in which potassium ions move through the filter, without water co-transport.