bioRxivSystems BiologyPreprint
Super Resolved Single-Cell Spatial Metabolomics from Multimodal Mass Spectrometry Imaging guided by Imaging Mass Cytometry
Efe OzturkiD, Abhijeet Venkataraman, Felix G. Rivera MoctezumaiD, Ahmet F. CoskuniD
- Citations
- 2
Abstract
Mass spectrometry imaging (MSI) is a powerful technique for spatially resolved analysis of metabolites and other biomolecules within biological tissues. However, the inherent low spatial resolution of MSI often limits its ability to provide detailed cellular-level information. To address this limitation, we propose a guided super-resolution (GSR) approach that leverages high-resolution Imaging Mass Cytometry (IMC) images to enhance the spatial resolution of low-resolution MSI data. By using these detailed IMC images as guides, we improve the resolution of MSI images, creating high-resolution metabolite maps. This enhancement facilitates more precise analysis of cellular structures and tissue architectures, providing deeper insights into super-resolved spatial metabolomics at the single-cell level.
- assay: metabolomics
- research focus: spatial domain detection
- research focus: dimensionality reduction
- approach: deep learning
- approach: statistical model
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