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The American Journal of Human GeneticsGenetic & Genomic MedicinePeer-reviewed journal article

ExPRSweb - An Online Repository with Polygenic Risk Scores for Common Health-related Exposures

Ying MaiD, Snehal B. PatiliD, Xiang ZhouiD, Bhramar MukherjeeiD, Lars G. FritscheiD

PDFDOIPreprint

Abstract

Complex traits are influenced by genetic risk factors, lifestyle, and environmental variables, so called exposures. Some exposures, e.g., smoking or lipid levels, have common genetic modifiers identified in genome-wide association studies. Since measurements are often unfeasible, Exposure Polygenic Risk Scores (ExPRSs) offer an alternative to study the influence of exposures on various phenotypes. Here, we collected publicly available summary statistics for 28 exposures and applied four common PRS methods to generate ExPRSs in two large biobanks, the Michigan Genomics Initiative and the UK Biobank. We established ExPRS for 27 exposures and demonstrated their applicability in phenome-wide association studies and as predictors for common chronic conditions. Especially, the addition of multiple ExPRSs showed, for several chronic conditions, an improvement compared prediction models that only included traditional, disease-focused PRSs. To facilitate follow-up studies, we share all ExPRS constructs and generated results via an online repository called ExPRSweb.

Citations
44
FWCI
4.97
Field percentile
top 3%

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