bioRxivNeurosciencePreprint
Integrated accounts of behavioral and neuroimaging data using flexible recurrent neural network models
Amir DezfouliiD, Richard W. MorrisiD, Fabio Ramos, Peter DayaniD, Bernard W. BalleineiD
Abstract
Neuroscience studies of human decision-making abilities commonly involve sub-jects completing a decision-making task while BOLD signals are recorded using fMRI. Hypotheses are tested about which brain regions mediate the effect of past experience, such as rewards, on future actions. One standard approach to this is model-based fMRI data analysis, in which a model is fitted to the behavioral data, i.e., a subjects choices, and then the neural data are parsed to find brain regions whose BOLD signals are related to the models internal signals. However, the internal mechanics of such purely behavioral models are not constrained by the neural data, and therefore might miss or mischaracterize aspects of the brain. To address this limitation, we introduce a new method using recurrent neural network models that are flexible enough to be jointly fitted to the behavioral and neural data. We trained a model so that its internal states were suitably related to neural activity during the task, while at the same time its output predicted the next action a subject would execute. We then used the fitted model to create a novel visualization of the relationship between the activity in brain regions at different times following a reward and the choices the subject subsequently made. Finally, we validated our method using a previously published dataset. We found that the model was able to recover the underlying neural substrates that were discovered by explicit model engineering in the previous work, and also derived new results regarding the temporal pattern of brain activity.
- organism: human
- assay: imaging
- research focus: cell-cell communication
- research focus: trajectory inference
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: deep learning
- approach: statistical model
- Citations
- 14
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