bioRxivNeurosciencePreprint
A deep-learning driven investigation of circuit basis for reflexive hypersensitivity to pain
Prannay ReddyiD, Jayesh S Vasudeva, Devanshi Piyush ShahiD, Jagat Narayan PrajapatiiD, Nikhila Harikumar, Arnab BarikiD
Abstract
Objectively measuring animal behavior is key to understanding the neural circuits underlying pain. Recent progress in machine vision has presented us with unprecedented scope in behavioral analysis. Here, we apply DeeplabCut (DLC) to dissect mouse behavior on the thermal-plate test -- a commonly used paradigm to ascertain supraspinal contributions to noxious thermal sensation and pain hypersensitivity. We determine the signature characteristics of the pattern of mouse movement and posture in 3D in response to a range of temperatures from innocuous to noxious on the thermal-plate test. Next, we test how acute chemical and chronic inflammatory injuries sensitize mouse behaviors. Repeated exposure to noxious temperatures on the thermal-plate can induce learning, and in this study, we design a novel assay and formulate an analytical pipeline that will facilitate the dissection of plasticity mechanisms in pain circuits in the brain. Last, we record and test how activating Tacr1 expressing PBN neurons -- a population responsive to sustained noxious stimuli-affects mouse behavior on the thermal plate test. Taken together, we demonstrate that by tracking a single body part of a mouse, we can reveal the behavioral signatures of mice exposed to noxious surface temperatures, report the alterations of the same when injured, and determine if a molecularly and anatomically defined pain responsive circuit plays a role in the reflexive hypersensitivity to thermal pain.
- organism: mouse
- assay: imaging
- research focus: cell type annotation
- research focus: clustering
- research focus: differential expression
- research focus: cell-cell communication
- approach: deep learning
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Differential modulation of thermal preference after sensitization by optogenetic or pharmacological activation of heat-sensitive nociceptors
Jerry Li, Maham Zain, Robert P. Bonin·Molecular PainPeer-reviewed·Jan 1, 2021
- A machine-vision approach for automated pain measurement at millisecond timescales
Jessica M. Jones, William Foster, … Ishmail Abdus-Saboor·eLifePeer-reviewed·Aug 6, 2020
- A spinoparabrachial circuit defined by Tacr1 expression drives pain
Arnab Barik, Anupama Sathyamurthy, … Alexander Theodore Chesler·eLifePeer-reviewed·Feb 16, 2021
- Converging inputs compete at the lateral parabrachial nuclei to dictate the affective-motivational responses to cold pain
Prannay Reddy, Jagat Narayan Prajapati, … Arnab Barik·PainPeer-reviewed·Nov 12, 2024
- Mapping the signatures of inflammatory pain and its relief
Manon Bohic, Luke A. Pattison, … Victoria E. Abraira·bioRxiv·Jun 16, 2021
- Machine-Learning-Guided Video Analysis Identifies Sound-Evoked Pain Behaviors from Facial Grimace and Body Cues in Mice
Benjamin J. Seicol, Amelie Valles, … Megan Beers Wood·bioRxiv·Sep 30, 2025