bioRxivGenomicsPreprint
A comprehensive assessment of benign genetic variability for neurodegenerative disorders
Rita João GuerreiroiD, Celeste SassiiD, Jesse Raphael GibbsiD, Connor W. EdsalliD, Dena G. HernandeziD, Kristelle S. Brown, Michelle K. LuptoniD, Laura ParkkineniD, Olaf AnsorgeiD, Angela HodgesiD, Mina RyteniD, Pentti J. TienariiD, Vivanna M. Van DeerliniD, John Q. TrojanowskiiD, Kevin MorganiD, John F. PowelliD, Andrew SingletoniD, John HardyiD, José BrásiD
- Citations
- 19
Abstract
1AbstractOver the last few years, as more and more sequencing studies have been performed, it has become apparent that the identification of pathogenic mutations is, more often than not, a complex issue. Here, with a focus on neurodegenerative diseases, we have performed a survey of coding genetic variability that is unlikely to be pathogenic.\n\nWe have performed whole-exome sequencing in 478 samples derived from several brain banks in the United Kingdom and the United States of America. Samples were included when subjects were, at death, over 60 years of age, had no signs of neurological disease and were subjected to a neuropathological examination, which revealed no evidence of neurodegeneration. This information will be valuable to studies of genetic variability as a causal factor for neurodegenerative syndromes. We envisage it will be particularly relevant for diagnostic laboratories as a filter step to the results being produced by either genome-wide or gene-panel sequencing. We have made this data publicly available at www.alzforum.org/exomes/hex.
- organism: human
- assay: whole-exome sequencing
- research focus: variant calling
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Whole Exome Sequencing in 20,197 Persons for Rare Variants in Alzheimer Disease
Neha S. Raghavan, Adam M. Brickman, … Richard P Mayeux·bioRxiv·Apr 23, 2018
- Is SORL1 a common genetic target across neurodegenerative diseases?: A multi-ancestry biobank scale assessment
Marzieh Khani, Sheila Yeboah, … Sara Bandrés‐Ciga·medRxiv·Feb 2, 2026
- Contribution of Mendelian disorders in a population-based pediatric neurodegeneration cohort
Rose Guo, Frank D. Mentch, … Elizabeth J. K. Bhoj·The Journal of PediatricsPeer-reviewed·Sep 1, 2022
- Genomic profiling of 553 uncharacterized neurodevelopment patients reveals a high proportion of recessive pathogenic variant carriers in an outbred population
Youngha Lee, Soojin Park, … Jong‐Hee Chae·Scientific ReportsPeer-reviewed·Jan 29, 2020
- Modelling population genetic screening in rare neurodegenerative diseases
Thomas P Spargo, Alfredo Iacoangeli, … Ammar Al‐Chalabi·BiomedicinesPeer-reviewed·Apr 23, 2025
- Non-Coding and Loss-of-Function Coding Variants in TET2 are Associated with Multiple Neurodegenerative Diseases
J. Nicholas Cochran, Ethan G. Geier, … Jennifer S. Yokoyama·The American Journal of Human GeneticsPeer-reviewed·Apr 23, 2020