medRxivGenetic & Genomic MedicinePreprint
Very high frequencies of Familial Breast Cancer, low BRCA1/2 mutations and high Luminal molecular subtypes in Eastern Saudi Arabia necessitate the hunt for novel breast cancer hub genes
T. Al-Qurashi, S. Balghonaim, H. Albunyan, H. Alduhailan, L. Almqhawi, I. F. Zafar, R. Abubaker, N. Alanazi, A. R. Malik, H. Mustafa, Z. Iqbal
Abstract
This study was carried out to find out incidence of familial breast cancer, frequencies of different histological and molecular subtypes of breast cancer, and proportion of breast cancer patient with BRCA1/2 mutations, to plan for its implementation in early cancer screening and personalized treatment in Eastern Saudi Arabia. The breast cancer incidence increased from 2009-2016 and peaked in 2012. Ductal carcinoma (80%) was the most common histological type and Luminal A/B the most common (74%) molecular types among all patients. The familial and non-familial breast cancer groups were compared based on their demographic and clinical characteristics. The mean age at diagnosis was 51.6{+/-}13.5 and 53.5{+/-}12.7 for familial and non-familial breast cancer patients respectively. A total of 10 (24.3%) of familial breast cancer patients were tested for BRCA gene mutations, and 5 (12.2%) were abnormal, making it 4.3% of total patients. In the familial group, significant correlation (p 0.04) was found between patients with age less than 50 and with more than one family member affected with breast or ovarian cancer. Significance was found between unilateral familial breast cancer and bone metastasis (p 0.004). In both familial and non-familial groups, significant correlation was found between unilateral breast cancer and liver metastasis (0.005 and 0.017 respectively). There was a significant association between unilateral non-familial breast cancer and luminal A molecular type (p 0.012). Analysis of TNM staging showed that (61%) of familial breast cancer patients were diagnosed at stage II. In conclusion, familial breast cancer incidence is increasingly high in Al-Ahsa region as compared to western populations which could be due to consanguineous marriage and social behaviors. It warrants further studies to explore familial breast cancer hub genes in Eastern Saudi Arabia and its implementation in early diagnosis and patient-tailored treatment of breast cancer.
- organism: human
- assay: bulk RNA-seq
- research focus: differential expression
- research focus: clustering
- research focus: cell type annotation
- research focus: gene regulatory network inference
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Prevalence and spectrum of germline BRCA1 and BRCA2 mutations in multiethnic cohort of breast cancer patients in Brunei Darussalam
Siti Nur Idayu Matusin, Nuramalina H Mumin, … Mas Rina Wati Haji Abdul Hamid·PLoS ONEPeer-reviewed·Jun 18, 2025
- Germline Mutation Analysis in Sporadic Breast Cancer Cases with Clinical Correlations
Sadia Ajaz, Sani-e-Zehra Zaidi, … Muhammad Ali Memon·Frontiers in GeneticsPeer-reviewed·Mar 9, 2022
- Segregation analysis of 17,425 population-based breast cancer families: evidence for genetic susceptibility and risk prediction
Shuai Li, Robert J. MacInnis, … Antonis C. Antoniou·The American Journal of Human GeneticsPeer-reviewed·Oct 1, 2022
- Assessing the variations in breast/ovarian cancer risk for Chinese BRCA1/2 carriers
Ang Li, Yi Zi, … Yujian Shi·Journal of OncologyPeer-reviewed·Mar 26, 2022
- Influence of family history on penetrance of hereditary cancers in a population setting
Leigh M. Jackson, Michael N. Weedon, … Caroline Fiona Wright·EClinicalMedicinePeer-reviewed·Sep 15, 2023
- Frequency of mutations in 21 hereditary breast and ovarian cancer susceptibility genes among high-risk Chinese individuals
D. Shao, S. Cheng, … M. Ye·Annals of OncologyPeer-reviewed·Oct 1, 2019