bioRxivSystems BiologyPreprint
Exploring the adaptability and robustness of the central carbon metabolism of Mycoplasma pneumoniae
Niels A. ZondervaniD, Eva YusiD, Daniel C. SéviniD, Sira MartíneziD, Carolina GalloiD, Peter J. SchaapiD, María Lluch‐SenariD, Luis G. SerranoiD, Vítor A. P. Martins dos SantosiD, Maria Suarez DieziD
Abstract
In this study we explored the adaptability and robustness of glycolysis and pyruvate metabolism of Mycoplasma pneumoniae (MPN). We used a dual approach, we analysed metabolomics data collected for a large number of OE and KO mutants and perturbation samples. Furthermore, we trained a dynamic model of central carbon metabolism and tested the models capacity to predict these mutants and perturbation samples as well as identify key controlling factors in central carbon metabolism. Our analysis of metabolite data as well as our model analysis indicate MPN metabolism is inherently robust against perturbations due to its network structure. Two key control hubs of central carbon metabolism were identified.
- organism: bacteria (other)
- assay: metabolomics
- research focus: differential expression
- approach: statistical model
- Citations
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