bioRxivPhysiologyPreprint
The microRNA regulatory landscape of skeletal muscle-derived extracellular vesicles
Yudai KawamotoiD, Atomu YamaguchiiD, Xiaoqi MaiD, Hidemi FujinoiD, Noriaki MaeshigeiD
Abstract
Skeletal muscle-derived extracellular vesicles (SkM-EVs) have recently been recognized as novel endocrine factors capable of facilitating inter-organ communication between skeletal muscle and distant organs. These vesicles transport various molecular cargoes, including microRNAs (miRNAs), which are essential regulators of post-transcriptional gene expression. In this study, we characterized the miRNA composition of SkM-EVs using small RNA sequencing and elucidated their putative biological roles via comprehensive bioinformatics analyses. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses of the predicted miRNA targets revealed that SkM-EV miRNAs are involved in several key pathways, including the FoxO signaling pathway, the insulin signaling pathway, and cancer-related pathways. Our findings suggest that SkM-EV miRNAs may simultaneously promote muscle differentiation and exert protective effects against diabetes and cancer development. These findings provide new insights into the systemic regulatory roles of SkM-EVs and highlight their therapeutic potential for muscular, metabolic, and oncological disorders.
- organism: human
- assay: bulk RNA-seq
- research focus: gene regulatory network inference
- approach: statistical model
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Skeletal muscle releases extracellular vesicles with distinct protein and miRNA signatures that accumulate and function within the muscle microenvironment
S. Watanabe, Y. Sudo, … Y. Yamauchi·bioRxiv·Nov 30, 2021
- Unveiling the functional heterogeneity of endogenous tissue extracellular vesicles in skeletal muscle through multi-omics
Yizhuo Wang, Peng Lou, … Jingping Liu·Chemical Engineering JournalPeer-reviewed·Apr 15, 2025
- Skeletal muscle tissue secretes more extracellular vesicles than white adipose tissue and myofibers are a major source ex vivo but not in vivo.
A. L. Estrada, Z. Valenti, … D. Lark·bioRxiv·Sep 27, 2020
- Identification of novel myokines and putative protein targets that mediate functional adaptations in response to chronic contractile activity induced skeletal muscle-extracellular vesicle treatment
Patience O. Obi, Tamiris F. G. Souza, … Ayesha Saleem·bioRxiv·Sep 9, 2024
- Micro RNAs are minor constituents of extracellular vesicles and are hardly delivered to target cells
M. Albanese, Y.-F. A. Chen, … W. Hammerschmidt·bioRxiv·May 20, 2020
- SVF-derived extracellular vesicles carry characteristic miRNAs in lipedema
Eleni Priglinger, Karin Strohmeier, … Susanne Wolbank·Scientific ReportsPeer-reviewed·Apr 29, 2020