Journal of Experimental BotanyPlant BiologyPeer-reviewed journal article
Molecular basis of differential adventitious rooting competence in poplar genotypes
A. Ranjan, I. Perrone, S. Alallaq, R. Singh, A. Rigal, F. Brunoni, W. Chitarra, F. Guinet, A. Kohler, F. Martin, N. R. Street, R. Bhalerao, V. Legue, C. Bellini
Abstract
O_LIRecalcitrant adventitious root (AR) development is a major hurdle in propagating commercially important woody plants. Although significant progress has been made to identify genes involved in subsequent steps of AR development, the molecular basis of differences in apparent recalcitrance to form AR between easy-to-root and difficult-to-root genotypes remains unknown. C_LIO_LITo address this, we generated cambium tissue-specific transcriptomic data from stem cuttings of hybrid aspen, T89 (difficult-to-root) and hybrid poplar OP42 (easy-to-root) and used transgenic approaches to verify the role of several transcription factors (TF) in the control of adventitious rooting. C_LIO_LIIncreased peroxidase activity is positively correlated with better rooting. We found differentially expressed genes encoding Reactive Oxygen Species (ROS) scavenging proteins to be enriched in OP42 compared to T89. A higher number of differentially expressed TF in OP42 compared to T89 cambium cells was revealed by a more intense transcriptional reprograming in the former. PtMYC2, a potential negative regulator, was less expressed in OP42 compared to T89. Using transgenic approaches, we have demonstrated that PttARF17.1 and PttMYC2.1 negatively regulate adventitious rooting. C_LIO_LIOur results provide insights into the molecular basis of genotypic differences in AR and implicate differential expression of the master regulator MYC2 as a critical player in this process. C_LI
- organism: plant (other)
- assay: bulk RNA-seq
- research focus: cell type annotation
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Jasmonate inhibits adventitious root initiation through transcriptional repression of CKX1 and activation of RAP2.6L transcription factor in Arabidopsis
A. Dob, A. Lakehal, … C. Bellini·bioRxiv·Apr 23, 2021
- Overexpression of SHORT-ROOT2 transcription factor enhanced the outgrowth of mature axillary buds in poplar trees
Minglei Yi, Heyu Yang, … Jiehua Wang·Journal of Experimental BotanyPeer-reviewed·Feb 1, 2022
- MDF regulates a network of auxin-dependent and -independent pathways of adventitious root regeneration in Arabidopsis.
Fahad Aldowigh, Rodrigo Matus, … Keith Lindsey·Plant DirectPeer-reviewed·Apr 1, 2025
- Auxin Regulation and MdPIN Expression during Adventitious Root Initiation in Apple Cuttings
L. Guan, Y. Li, … Z.-m. Cheng·bioRxiv·Mar 18, 2020
- Single-cell transcriptomic atlas reveals that vascular tissues orchestrate cell fate transitions to initiate adventitious root formation in tomato
Shipeng Yang, Cheng Si, … Ruolin Yang·bioRxiv·Dec 27, 2025
- The microRNA476a/RFL module regulates adventitious root formation through a mitochondria-dependent pathway in Populus
K. Luo, C. Xu, … V. L. Chiang·bioRxiv·Nov 22, 2019