Exploring Okra-Derived Compounds as Prospective Aromatase Inhibitors: A Computational Study for Enhanced Breast Cancer Therapy
Dhrithi Jayasimha MalluriD, B. Lavanya, Sheshadri S. TemkariD, V. Arun, Benedict C. Paul
Abstract
Breast cancer with estrogen receptor positivity represents itself as the most prevalent malignancy among postmenopausal women. One of the promising therapeutic approach involves the use of Aromatase Inhibitors, which competitively bind to aromatase, reducing estrone and estradiol levels. While current drugs have improved survival rates, they are not without adverse effects. Consequently, this study explores the computational screening of medicinally relevant compounds derived from Okra for potential Aromatase Inhibition. Molecular Docking, employing AMDock v1.5.2, was utilized to assess binding affinities with aromatase (PDB:3EQM). Subsequently, in-depth molecular interactions were examined using Discovery Studio Visualizer v4.5, and the stability of docked complexes was evaluated via Molecular Dynamics with the GROMACS package, focusing on RMSD, RMSF, H-bond count, and SASA. The pharmacokinetic properties of the Okra compounds were predicted using admetSAR v2.0. Our findings highlight Quercetin 3-gentiobioside as a standout candidate, demonstrating superior binding affinity (-10 kcal/mol) and an Estimated Ki of 46.77 nM compared to Letrozole and other Okra compounds. Molecular dynamics analysis confirms the stability of Quercetin 3-gentiobioside binding in terms of H-bonds and conformational integrity. In conclusion, our computational investigation identifies Quercetin 3-gentiobioside, along with Quercetin 3-O-rutinoside and Hyperin, as promising candidates for preclinical studies in the pursuit of potential Aromatase Inhibitors.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 7
- FWCI
- 1.48
- Field percentile
- top 18%
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Computational Assessment of Aromatase: Unmasking Therapeutic Avenues for Female Hormonal Disorders
Sandesh P. Koirala, Bhawana S. Magar, … Pramod Aryal·bioRxiv·Sep 13, 2023
- Mechanisms of allosteric and mixed mode aromatase inhibitors
S. A. Souza, A. Held, … H. L. Ng·bioRxiv·Oct 15, 2020
- Anti-cancer Potential of Moringa oleifera on BRCA1 Gene: Systems Biology
Toheeb Adewale Balogun, Kaosarat D. Buliaminu, … Taiwo J Idowu·Bioinformatics and Biology InsightsPeer-reviewed·Jan 1, 2021
- Inhibition of Aromatase by Hops, Licorice Species, and their bioactive compounds in Postmenopausal Breast Tissue
A. Hajirahimkhan, C. E. Howell, … B. M. Dietz·bioRxiv·May 6, 2022
- Three-Dimensional Quantitative Structure-Activity Relationships and Molecular Dynamic Simulations Studies to Discover Aurora Kinase-B Inhibitors
Selvam Athavan Alias Anand, S. Kabilan·bioRxiv·Jul 29, 2024
- Phytochemicals from Daucus carota have therapeutic potential against Triple-Negative Breast Cancer PDK1 and PLK1.
Kayode Yomi Raheem, Modinat Aina Abayomi, … Muhammad Muddassar·bioRxiv·Nov 4, 2024