bioRxivEcologyPreprint
Changes in capture availability due to infection can lead to correctable biases in population-level infectious disease parameters
Abstract
Correctly identifying the strength of selection parasites impose on hosts is key to predicting epidemiological and evolutionary outcomes. However, behavioral changes due to infection can alter the capture probability of infected hosts and thereby make selection difficult to estimate by standard sampling techniques. Mark-recapture approaches, which allow researchers to determine if some groups in a population are less likely to be captured than others, can mitigate this concern. We use an individual-based simulation platform to test whether changes in capture rate due to infection can alter estimates of three key outcomes: 1) reduction in offspring numbers of infected parents, 2) the relative risk of infection for susceptible genotypes compared to resistant genotypes, and 3) change in allele frequencies between generations. We find that calculating capture probabilities using mark-recapture statistics can correctly identify biased relative risk calculations. For detecting fitness impact, the bounded nature of the distribution possible offspring numbers results in consistent underestimation of the impact of parasites on reproductive success. Researchers can mitigate many of the potential biases associated with behavioral changes due to infection by using mark-recapture techniques to calculate capture probabilities and by accounting for the shapes of the distributions they are attempting to measure.
- research focus: host-pathogen & immune response
- research focus: benchmarking
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Population size estimation when multiple samples carrying the risk of misidentification are taken within the same capture occasion from the same individual
Rémi Fraysse, Rémi Choquet, Roger Pradel·Peer Community JournalPeer-reviewed·Apr 29, 2026
- Using visual encounter data to improve capture-recapture abundance estimates
M. B. Joseph, R. A. Knapp·bioRxiv·Jan 22, 2020
- Estimating the overlap between two malaria parasites’ var repertoires
Daniel B. Larremore·bioRxiv·Jun 11, 2018
- Causation without correlation: parasite-mediated frequency-dependent selection and infection prevalence
C. M. Lively, J. Xu, F. Ben-Ami·bioRxiv·Nov 13, 2021
- Linking Parasitism to Network Centrality and the Impact of Sampling Bias in its Interpretation
Z. XU, A. J. J. MacIntosh, … J. Duboscq·bioRxiv·Jun 7, 2021
- On the stock structure bias of the space-time fidelity of mark-recapture studies
Lars Witting·bioRxiv·May 14, 2026