Sign in
BioinformaticsBioinformatics
Peer-reviewed journal article

GENLIB: new function to simulate haplotype transmission in large complex genealogies

Mohan Rakesh, Hélène VézinaiD, Catherine LapriseiD, Ellen E. FreemaniD, Kelly M. BurkettiD, Marie‐Hélène Roy‐GagnoniD

Abstract

SummaryFounder populations with deep genealogical data are well suited for investigating genetic variants contributing to diseases. Here, we present a new function added to the genealogical analysis R package GENLIB, which can simulate the transmission of haplotypes from founders to probands along very large and complex user-specified genealogies. Availability and implementationThe new function is available in the latest version of the GENLIB package (v1.1.6), available on the CRAN repository and from https://github.com/R-GENLIB/GENLIB. Stand-alone scripts for analyzing the output of the function can be accessed at https://github.com/R-GENLIB/simuhaplo_scripts.

PDFDOICode

02 /Specification & Classification

Click any tag to browse matching papers
Citations
1
FWCI
0.17
Field percentile
44th percentile

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISBakar '26Gupta '26Nieuwoudt '18Nieuwoudt '19Guardado '25Murphy '26
61% semantic matchBioinformatics
Abu Bakar, Rutaba Gul, Tayyab Afghani+1 more·bioRxiv·Jul 23, 2026