bioRxivPlant Biology
Decoding the gene co-expression network underlying the ability of Gevuina avellana Mol. to live in diverse light conditions
E. Ostria-Gallardo, A. Ranjan, Y. Ichihashi, L. Corcuera, N. Sinha
Abstract
O_LIGevuina avellana Mol. (Proteaceae) is a typical tree from the South American temperate rainforest. Although this species mostly regenerates in shaded understories, it exhibits an exceptional ecological breadth, being able to live under a wide range of light conditions. Here we studied the genetic basis regulating physiological acclimation of the photosynthetic responses of G. avellana under contrasting light conditions.\nC_LIO_LIWe analyzed carbon assimilation and light energy used for photochemical process in plants acclimated to contrasting light conditions. Also, we used a transcriptional profile of leaf primordia from G. avellana saplings growing under different light environments to identify the gene co-expression network underpinning photosynthetic performance and light-related processes.\nC_LIO_LIThe photosynthetic parameters revealed optimal performance regardless of light conditions. Strikingly, the mechanism involved in dissipation of excess light energy showed no significant differences between high and low-light acclimated plants. The gene co-expression network defined a community structure consistent with the photochemical responses, including genes involved mainly in assembly and functioning of photosystems, photoprotection, and retrograde signaling.\nC_LIO_LIOur ecophysiological genomics approach provides an understanding of the molecular regulatory mechanisms that allows this tree to have an optimal balance between photochemical, photoprotective and antioxidant performance in the diverse light habitats it encounters in nature.\nC_LI
- organism: plant (other)
- assay: bulk RNA-seq
- research focus: gene regulatory network inference
- approach: statistical model
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