NeoCOMM: A Neocortical Neuroinspired Computational Model for the Reconstruction and Simulation of Epileptiform Events
Mariam Al HarrachiD, Maxime YochumiD, Giulio RuffiniiD, Fabrice BartoloméiiD, Fabrice WendlingiD, Pascal BenquetiD
Abstract
Understanding the pathophysiological dynamics which underline interictal epileptiform events (IEEs) such as epileptic spikes, spike-and-waves or High-frequency oscillations (HFOs) is of major importance in the context of neocortical refractory epilepsy, as it paves the way for the development of novel therapies. Typically, these events are detected in local field potential (LFP) recordings obtained through depth electrodes during pre-surgical investigations. Although essential, the underlying pathophysiological mechanisms for the generation of these epileptic neuromarkers remain unclear. The aim of this paper is to propose a novel neurophysiologically relevant reconstruction of the neocortical microcircuitry in the context of epilepsy. This reconstruction intends to facilitate the analysis of a comprehensive set of parameters encompassing physiological, morphological, and biophysical aspects that directly impact the generation and recording of different IEEs. Accordingly, a novel microscale computational model of an epileptic neocortical column was introduced. This model incorporates the intricate multilayered structure of the cortex and allows for the simulation of realistic interictal epileptic signals. The proposed model was validated through comparisons with real IEEs recorded using intracranial stereo-electroencephalography (SEEG) signals from both humans and animals. Using the model, the user can recreate epileptiform patterns observed in different species (human, rodent, and mouse) and study the intracellular activity associated with these patterns. Our model allowed us to unravel the relationship between glutamatergic and GABAergic synaptic transmission of the epileptic neural network and the type of generated IEE. Moreover, sensitivity analyses allowed for the exploration of the pathophysiological parameters responsible for the transitions between these events. Finally, the presented modeling framework also provides an Electrode Tissue Model (ETI) that adds realism to the simulated signals and offers the possibility of studying their sensitivity to the electrode characteristics. The model (NeoCoMM) presented in this work can be of great use in different applications since it offers an in silico framework for sensitivity analysis and hypothesis testing. It can also be used as a starting point for more complex studies.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 10
- FWCI
- 2.44
- Field percentile
- top 11%
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A personalizable autonomous neural mass model of epileptic seizures
Edmundo Lopez-Sola, Roser Sanchez-Todo, … Giulio Ruffini·Journal of Neural EngineeringPeer-reviewed·Aug 22, 2022
- Computational modeling of seizure spread on a cortical surface
Viktor Ší́p, Maxime Guye, … Viktor Jirsa·Journal of Computational NeurosciencePeer-reviewed·Oct 22, 2021
- Developing hippocampal spheroids model ictogenesis and epileptogenesis
John Wesley Ephraim, Davide Caron, … Gabriella Panuccio·bioRxiv·Jan 6, 2023
- A Neural Mass Modelling Framework for Evaluating EEG Source Localisation of Seizure Activity
Pok Him Siu, Philippa J. Karoly, … David Bruce Grayden·Journal of Neural EngineeringPeer-reviewed·Jun 23, 2026
- NeoCoMM: Neocortical Computational Microscale Model
Mariam Al Harrach, Maxime Yochum, Fabrice Wendling·bioRxiv·Apr 8, 2024
- A phenomenological model of neuroimmune interactions in epileptogenesis
Danylo Batulin, Fereshteh Lagzi, … Jochen Triesch·bioRxiv·Jul 30, 2021