Additive associations of variants at the expression quantitative trait loci of TFR2 and EPO in a linkage disequilibrium block with hypochromic erythropoiesis

Abstract

Reciprocal interactions between iron metabolism and erythropoiesis are well established in patients and animal models under stress. To elucidate this interplay in healthy individuals, we conducted a genome-wide association study (GWAS) involving 52,822 individuals of Japanese ancestry, and integrated the results with plasma biochemical parameters related to iron metabolism. We identified 30 genetic variants associated with erythrocyte traits, four of which also influenced serum iron concentrations and/or transferrin saturation within normal physiological ranges. These findings indicate a close interaction between erythropoiesis and iron metabolism, even in the absence of disease. Among the identified variants, we focused on rs2075672, an expression quantitative trait locus (eQTL) for TFR2 (transferrin receptor 2). This variant resides within a linkage disequilibrium (LD) block that also includes rs1617640, a known causal variant at the EPO (erythropoietin) eQTL for increased erythrocyte counts. Individuals carrying this multiple causal variant-containing LD (mcv-LD) block exhibited mild hypochromic erythropoiesis. Our analyses revealed that the minor allele of rs2075672 is correlated with decreases in serum iron and erythrocytic hemoglobin concentrations, whereas the minor allele of rs1617640 appeared to primarily drive an increase in the erythrocyte count. Longitudinal follow-up analyses reproduced the original data and confirmed the persistence of hypochromic erythropoiesis in mcv-LD block carriers for at least five years. These data highlight the existence of mcv-LD blocks, carriers of which present unique phenotypes characterized by combined traits associated with each causal variant within the block. Graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=92 SRC="FIGDIR/small/25335626v1_ufig1.gif" ALT="Figure 1"> View larger version (31K): org.highwire.dtl.DTLVardef@4858c1org.highwire.dtl.DTLVardef@1bb1849org.highwire.dtl.DTLVardef@377813org.highwire.dtl.DTLVardef@1ac539d_HPS_FORMAT_FIGEXP M_FIG C_FIG